Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Acoerulea_Aquca_039_00068 Aquca_039_00068 |
scaffold_39 | 798545 | 799189 | Phytozome | [[Species:|]]"Species:" cannot be used as a page name in this wiki. | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Acoerulea_Aquca_039_00068.1 Aquca_039_00068.1 PAC:22062222 |
Low | No | 645 | Get ORF Coding potential... Type: noncoding Potential: -0.886 Folding energies... MFEI: -24.719 AMFE: -0.625 GC content %: 39.535 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Acoerulea_Aquca_039_00068.1 | RepBase (RepeatMasker) | 2014-01-31 | Copia-46_Mad-LTR |