Gene

Egrandis Eucgr.A00025

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Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Egrandis_Eucgr.A00025
Eucgr.A00025
Chr01 2602534 2603316 Phytozome v2.0 Eucalyptus_grandis
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Egrandis_Eucgr.A00025.1
Eucgr.A00025.1
PAC:32047544
High No 698
Coding potential...
Type: noncoding Potential: -1.041
Folding energies...
MFEI: -26.117 AMFE: -0.658
GC content
%: 39.685


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Eucgr.A00025.png