Gene

Mtruncatula Medtr3g061100

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Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Mtruncatula_Medtr3g061100
Medtr3g061100
chr3 24264177 24264473 Phytozome Mt4.0v1 Medicago_truncatula
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Mtruncatula_Medtr3g061100.1
Medtr3g061100.1
PAC:31061081
High No 297
Coding potential...
Type: noncoding Potential: -0.862
Folding energies...
MFEI: -23.872 AMFE: -0.558
GC content
%: 42.761


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Medtr3g061100.png