Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Carietinum_Ca_10598 [ Ca_10598] |
Ca8 | 7864484 | 7865589 | v1 | Cicer arietinum (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Carietinum_Ca_10598 Ca_10598 |
Low | No | 303 | OG0136493 | Get ORF Coding potential... Type: noncoding Potential: -0.560 Folding energies... MFEI: -21.815 AMFE: -0.529 GC content %: 41.254 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Carietinum_Ca_10598 | SwissProt | 2021-04-01 | Q9XI47 | 6.03e-10 |
Carietinum_Ca_10598 | RepBase (RepeatMasker) | 2014-01-31 | LTR/ERV1 |