Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU1Hr1G093450 [ HORVU1Hr1G093450] |
chr1H | 553057632 | 553060296 | r1 | Hordeum vulgare (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Hvulgare_HORVU1Hr1G093450.1 HORVU1Hr1G093450.1 |
High | No | 2553 | OG0005734 | Get ORF Coding potential... Type: noncoding Potential: -1.050 Folding energies... MFEI: -29.475 AMFE: -0.645 GC content %: 45.672 | |
Hvulgare_HORVU1Hr1G093450.2 HORVU1Hr1G093450.2 |
High | No | 2560 | OG0005734 | Get ORF Coding potential... Type: noncoding Potential: -0.802 Folding energies... MFEI: -29.449 AMFE: -0.644 GC content %: 45.703 | |
Hvulgare_HORVU1Hr1G093450.3 HORVU1Hr1G093450.3 |
High | No | 2665 | OG0005734 | Get ORF Coding potential... Type: noncoding Potential: -1.149 Folding energies... MFEI: -29.869 AMFE: -0.646 GC content %: 46.229 | |
Hvulgare_HORVU1Hr1G093450.4 HORVU1Hr1G093450.4 |
High | No | 1318 | OG0037415 | Get ORF Coding potential... Type: noncoding Potential: -0.907 Folding energies... MFEI: -34.135 AMFE: -0.641 GC content %: 53.263 | |
Hvulgare_HORVU1Hr1G093450.5 HORVU1Hr1G093450.5 |
High | No | 542 | OG0037416 | Get ORF Coding potential... Type: noncoding Potential: -0.932 Folding energies... MFEI: -27.066 AMFE: -0.580 GC content %: 46.679 |