Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Oglumipatula_OGLUM01G43420 [ OGLUM01G43420] |
1 | 41234079 | 41238007 | v1.5 | Oryza glumipatula (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Oglumipatula_OGLUM01G43420.1 OGLUM01G43420.1 |
High | No | 276 | OG0004219 | Get ORF Coding potential... Type: noncoding Potential: -1.120 Folding energies... MFEI: -43.623 AMFE: -0.680 GC content %: 64.130 | |
Oglumipatula_OGLUM01G43420.2 OGLUM01G43420.2 |
High | No | 231 | OG0004219 | Get ORF Coding potential... Type: noncoding Potential: -0.950 Folding energies... MFEI: -43.636 AMFE: -0.720 GC content %: 60.606 |