Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20720800 [ AET2Gv20720800] |
2D | 404351339 | 404356897 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET2Gv20720800.2 AET2Gv20720800.2 |
High | No | 1338 | OG0070770 | Get ORF Coding potential... Type: noncoding Potential: -1.194 Folding energies... MFEI: -24.230 AMFE: -0.630 GC content %: 38.490 | |
Atauschii_AET2Gv20720800.3 AET2Gv20720800.3 |
High | No | 1057 | OG0024720 | Get ORF Coding potential... Type: noncoding Potential: -0.268 Folding energies... MFEI: -26.471 AMFE: -0.582 GC content %: 45.506 | |
Atauschii_AET2Gv20720800.5 AET2Gv20720800.5 |
High | No | 1104 | OG0024720 | Get ORF Coding potential... Type: noncoding Potential: -0.277 Folding energies... MFEI: -25.054 AMFE: -0.619 GC content %: 40.489 | |
Atauschii_AET2Gv20720800.6 AET2Gv20720800.6 |
High | No | 319 | OG0070771 | Get ORF Coding potential... Type: noncoding Potential: -0.499 Folding energies... MFEI: -25.329 AMFE: -0.535 GC content %: 47.335 |