Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Atauschii_AET4Gv20342900 [ AET4Gv20342900] |
4D | 177990080 | 178003225 | v4 | Aegilops tauschii (Ensembl Plants 51) | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Atauschii_AET4Gv20342900.13 AET4Gv20342900.13 |
Low | No | 1014 | OG0025315 | Get ORF Coding potential... Type: coding Potential: 0.152 Folding energies... MFEI: -25.118 AMFE: -0.578 GC content %: 43.491 | |
Atauschii_AET4Gv20342900.14 AET4Gv20342900.14 |
Low | No | 1207 | OG0025315 | Get ORF Coding potential... Type: coding Potential: 0.341 Folding energies... MFEI: -25.642 AMFE: -0.587 GC content %: 43.662 | |
Atauschii_AET4Gv20342900.22 AET4Gv20342900.22 |
High | No | 655 | OG0074752 | Get ORF Coding potential... Type: noncoding Potential: -1.382 Folding energies... MFEI: -24.855 AMFE: -0.624 GC content %: 39.847 |