Aalpina AALP AA1G171000

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Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Aalpina_AALP_AA1G171000
[ AALP_AA1G171000]
1 10805682 10806906 v4 Arabis alpina (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Aalpina_KFK43774
KFK43774
High No 277 OG0092939
Coding potential...
Type: noncoding Potential: -0.579
Folding energies...
MFEI: -25.596 AMFE: -0.576
GC content
%: 44.404
Aalpina_KFK43775
KFK43775
High No 240 OG0092940
Coding potential...
Type: noncoding Potential: -0.602
Folding energies...
MFEI: -30.125 AMFE: -0.640
GC content
%: 47.083


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Aalpina_AALP_AA1G171000.png