Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Aalpina_AALP_AA8G379600 [ AALP_AA8G379600] |
8 | 32364336 | 32366000 | v4 | Arabis alpina (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Aalpina_KFK27413 KFK27413 |
Low | No | 1665 | OG0091932 | Get ORF Coding potential... Type: noncoding Potential: -1.122 Folding energies... MFEI: -27.027 AMFE: -0.657 GC content %: 41.141 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Aalpina_KFK27413 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Copia |