Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Aalpina_AALP_AAs45999U000800 [ AALP_AAs45999U000800] |
KL979243 | 63137 | 64571 | v4 | Arabis alpina (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Aalpina_KFK23424 KFK23424 |
High | No | 264 | OG0027175 | Get ORF Coding potential... Type: noncoding Potential: -0.970 Folding energies... MFEI: -26.364 AMFE: -0.585 GC content %: 45.076 | |
Aalpina_KFK23425 KFK23425 |
Low | No | 650 | OG0027175 | Get ORF Coding potential... Type: noncoding Potential: -1.138 Folding energies... MFEI: -25.108 AMFE: -0.621 GC content %: 40.462 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Aalpina_KFK23425 | RepBase (RepeatMasker) | 2014-01-31 | rRNA |