Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Achinensis_CEY00_Acc11292 [ CEY00_Acc11292] |
LG10 | 6469878 | 6474976 | Red5_PS1_1.69.0 | Actinidia chinensis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Achinensis_PSS19249 PSS19249 |
Low | No | 3333 | OG0067218 | Get ORF Coding potential... Type: noncoding Potential: -1.091 Folding energies... MFEI: -23.627 AMFE: -0.655 GC content %: 36.094 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Achinensis_PSS19249 | SwissProt | 2021-04-01 | Q8GXX0 | 2.7e-4 |
Achinensis_PSS19249 | RepBase (RepeatMasker) | 2014-01-31 | SINE/tRNA |