Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Achinensis_CEY00_Acc26727 [ CEY00_Acc26727] |
LG23 | 24522529 | 24523147 | Red5_PS1_1.69.0 | Actinidia chinensis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Achinensis_PSR96675 PSR96675 |
Low | No | 619 | OG0015771 | Get ORF Coding potential... Type: noncoding Potential: -0.771 Folding energies... MFEI: -24.869 AMFE: -0.647 GC content %: 38.449 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Achinensis_PSR96675 | RepBase (RepeatMasker) | 2014-01-31 | DNA/CMC-Chapaev; DNA/CMC-EnSpm; RC/Helitron; SINE/tRNA |