Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Bvulgaris_BVRB_1g005220 [ BVRB_1g005220] |
1 | 5715090 | 5751753 | v1.2 | Beta vulgaris (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Bvulgaris_KMT20538 KMT20538 |
Low | No | 17714 | OG0105899 | Get ORF Coding potential... Type: noncoding Potential: -0.995 Folding energies... MFEI: -24.853 AMFE: -0.710 GC content %: 35.006 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Bvulgaris_KMT20538 | RepBase (RepeatMasker) | 2014-01-31 | DNA/hAT-Tag1; LTR/Copia |