Ccrispus CHC T00000001001

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Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Ccrispus_CHC_T00000001001
[ CHC_T00000001001]
HG001880 27873 28144 v2 Chondrus crispus (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Ccrispus_CDF37846
CDF37846
High No 272 OG0134378
Coding potential...
Type: noncoding Potential: -0.730
Folding energies...
MFEI: -34.044 AMFE: -0.535
GC content
%: 63.603


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Ccrispus_CHC_T00000001001.png