Csativus Csa 5G138470

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Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Csativus_Csa_5G138470
[ Csa_5G138470]
5 3336355 3339431 v2 Cucumis sativus (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Csativus_KGN49815
KGN49815
High No 292 OG0017719
Coding potential...
Type: noncoding Potential: -1.570
Folding energies...
MFEI: -27.466 AMFE: -0.590
GC content
%: 46.575


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Csativus_Csa_5G138470.png