Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Macuminata_Ma00_g00280 [ Ma00_g00280] |
CAJGYN010000024.1 | 842152 | 850459 | v2 | Musa acuminata (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Macuminata_Ma00_t00280.1 Ma00_t00280.1 |
High | No | 720 | OG0019888 | Get ORF Coding potential... Type: noncoding Potential: -0.466 Folding energies... MFEI: -25.875 AMFE: -0.580 GC content %: 44.583 | |
Macuminata_Ma00_t00280.2 Ma00_t00280.2 |
High | No | 1197 | OG0019888 | Get ORF Coding potential... Type: noncoding Potential: -0.549 Folding energies... MFEI: -30.794 AMFE: -0.636 GC content %: 48.454 | |
Macuminata_Ma00_t00280.3 Ma00_t00280.3 |
High | No | 1203 | OG0019888 | Get ORF Coding potential... Type: noncoding Potential: -0.536 Folding energies... MFEI: -30.756 AMFE: -0.634 GC content %: 48.545 |