Obarthii OBART01G00950

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Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Obarthii_OBART01G00950
[ OBART01G00950]
1 584800 585048 v1 Oryza barthii (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Obarthii_OBART01G00950.1
OBART01G00950.1
High No 249 OG0239937
Coding potential...
Type: noncoding Potential: -0.424
Folding energies...
MFEI: -51.446 AMFE: -0.724
GC content
%: 71.084


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Obarthii_OBART01G00950.png