Pdulcis Prudul26B000443

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Pdulcis_Prudul26B000443
[ Prudul26B000443]
pdulcis26_s0002 744739 745065 v2 Prunus dulcis (Ensembl Plants 51)
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Pdulcis_VVA10214
VVA10214
High No 327 OG0300302
Coding potential...
Type: noncoding Potential: -0.588
Folding energies...
MFEI: -33.456 AMFE: -0.595
GC content
%: 56.269


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Pdulcis_Prudul26B000443.png