Qlobata QL01p001837

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Qlobata_QL01p001837
[ QL01p001837]
1 1836601 1837330 v3 Quercus lobata (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Qlobata_QL01p001837:mrna
QL01p001837:mrna
High No 630 [1]
Coding potential...
Type: noncoding Potential: -0.027
Folding energies...
MFEI: -21.206 AMFE: -0.596
GC content
%: 35.556


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Qlobata_QL01p001837.png