Rchinensis RchiOBHm CPg0502221

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Rchinensis_RchiOBHm_CPg0502221
[ RchiOBHm_CPg0502221]
Pt 65697 66891 v2 Rosa chinensis (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Rchinensis_PRQ15707
PRQ15707
Low No 1195 OG0305813
Coding potential...
Type: coding Potential: 4.798
Folding energies...
MFEI: -21.289 AMFE: -0.617
GC content
%: 34.477


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Rchinensis_RchiOBHm_CPg0502221.png