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Matches to external databases
The lncRNAs from GreeNC have been analysed against the following databases: SwissProt, miRBase, Rfam, RepBase (RepeatMasker), NONCODE, and lncRNAdb. This table displays any association with these databases.
| Transcript alias | Database | Version | Hit | Evalue |
|---|---|---|---|---|
| Atauschii_AET2Gv20805300.23 | SwissProt | 2021-04-01 | Q6EX42 | 5.49e-9 |
| Atauschii_AET2Gv20805300.39 | SwissProt | 2021-04-01 | Q6EX42 | 5.32e-8 |
| Atauschii_AET2Gv20805300.9 | SwissProt | 2021-04-01 | Q6EX42 | 2.22e-9 |
| Atauschii_AET2Gv20805300.18 | SwissProt | 2021-04-01 | F4JMJ1 | 7.68e-9 |
| Atauschii_AET2Gv20805300.33 | SwissProt | 2021-04-01 | Q6EX42 | 6.31e-9 |
| Atauschii_AET2Gv20805300.5 | SwissProt | 2021-04-01 | F4JMJ1 | 2.22e-10 |
| Atauschii_AET2Gv20805300.12 | SwissProt | 2021-04-01 | Q6EX42 | 3.98e-9 |
| Atauschii_AET2Gv20805300.45 | SwissProt | 2021-04-01 | Q6EX42 | 2.37e-9 |
| Atauschii_AET2Gv20805300.25 | SwissProt | 2021-04-01 | Q6EX42 | 2.93e-9 |
| Atauschii_AET2Gv20805300.4 | SwissProt | 2021-04-01 | F4JMJ1 | 1.07e-8 |
| Atauschii_AET2Gv20805300.53 | Rfam | 14.6 | MIR1122 | 7.6e-16 |
| Atauschii_AET2Gv20805300.19 | SwissProt | 2021-04-01 | Q6EX42 | 5.67e-9 |
| Atauschii_AET2Gv20805300.34 | SwissProt | 2021-04-01 | Q6EX42 | 4.75e-9 |
| Atauschii_AET2Gv20805300.51 | SwissProt | 2021-04-01 | Q6EX42 | 2.13e-7 |
| Atauschii_AET2Gv20805300.14 | SwissProt | 2021-04-01 | F4JMJ1 | 2.39e-10 |
| Atauschii_AET2Gv20805300.26 | SwissProt | 2021-04-01 | F4JMJ1 | 4.98e-10 |
| Atauschii_AET2Gv20805300.46 | SwissProt | 2021-04-01 | F4JMJ1 | 9.55e-11 |
| Atauschii_AET2Gv20805300.41 | SwissProt | 2021-04-01 | Q6EX42 | 2.59e-9 |
| Atauschii_AET2Gv20805300.1 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L1 | |
| Atauschii_AET2Gv20805300.2 | SwissProt | 2021-04-01 | F4JMJ1 | 8.45e-10 |
| Atauschii_AET2Gv20805300.36 | SwissProt | 2021-04-01 | Q6EX42 | 6.64e-9 |
| Atauschii_AET2Gv20805300.6 | SwissProt | 2021-04-01 | F4JMJ1 | 2.16e-10 |
| Atauschii_AET2Gv20805300.15 | SwissProt | 2021-04-01 | Q6EX42 | 6.35e-9 |
| Atauschii_AET2Gv20805300.3 | SwissProt | 2021-04-01 | F4JMJ1 | 1.62e-8 |
| Atauschii_AET2Gv20805300.47 | SwissProt | 2021-04-01 | Q6EX42 | 3.89e-9 |
| Atauschii_AET2Gv20805300.1 | SwissProt | 2021-04-01 | Q6EX42 | 1.23e-8 |
| Atauschii_AET2Gv20805300.42 | SwissProt | 2021-04-01 | Q6EX42 | 3.41e-9 |
| Atauschii_AET2Gv20805300.33 | RepBase (RepeatMasker) | 2014-01-31 | LINE/L1 | |
| Atauschii_AET2Gv20805300.20 | SwissProt | 2021-04-01 | Q6EX42 | 5.47e-8 |
| Atauschii_AET2Gv20805300.37 | SwissProt | 2021-04-01 | F4JMJ1 | 6.78e-10 |
| Atauschii_AET2Gv20805300.7 | SwissProt | 2021-04-01 | Q6EX42 | 3.31e-9 |
| Atauschii_AET2Gv20805300.16 | SwissProt | 2021-04-01 | Q6EX42 | 3.85e-9 |
| Atauschii_AET2Gv20805300.30 | SwissProt | 2021-04-01 | Q6EX42 | 3.23e-9 |
| Atauschii_AET2Gv20805300.48 | SwissProt | 2021-04-01 | Q6EX42 | 6.35e-8 |
| Atauschii_AET2Gv20805300.10 | SwissProt | 2021-04-01 | Q6EX42 | 2.51e-9 |