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Matches to external databases
The lncRNAs from GreeNC have been analysed against the following databases: SwissProt, miRBase, Rfam, RepBase (RepeatMasker), NONCODE, and lncRNAdb. This table displays any association with these databases.
| Transcript alias | Database | Version | Hit | Evalue |
|---|---|---|---|---|
| Hvulgare_HORVU0Hr1G015890.6 | RepBase (RepeatMasker) | 2014-01-31 | DNA/TcMar-Stowaway; LTR/DIRS | |
| Hvulgare_HORVU0Hr1G015890.1 | RepBase (RepeatMasker) | 2014-01-31 | DNA/TcMar-Stowaway; LTR/DIRS | |
| Hvulgare_HORVU0Hr1G015890.5 | SwissProt | 2021-04-01 | Q9LJR3 | 1.84e-11 |
| Hvulgare_HORVU0Hr1G015890.7 | RepBase (RepeatMasker) | 2014-01-31 | DNA/TcMar-Stowaway; LTR/DIRS | |
| Hvulgare_HORVU0Hr1G015890.10 | RepBase (RepeatMasker) | 2014-01-31 | DNA/TcMar-Stowaway; LTR/DIRS | |
| Hvulgare_HORVU0Hr1G015890.6 | SwissProt | 2021-04-01 | Q9LJR3 | 1.8e-11 |
| Hvulgare_HORVU0Hr1G015890.1 | SwissProt | 2021-04-01 | Q9LJR3 | 1.77e-11 |
| Hvulgare_HORVU0Hr1G015890.8 | RepBase (RepeatMasker) | 2014-01-31 | DNA/TcMar-Stowaway; LTR/DIRS |