Gene

Acomosus Aco003625

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Acomosus_Aco003625
Aco003625
LG17 4345863 4349359 Phytozome v3 Ananas_comosus
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Acomosus_Aco003625.1
Aco003625.1
PAC:33043917
High No 790
Coding potential...
Type: noncoding Potential: -1.591
Folding energies...
MFEI: -28.949 AMFE: -0.623
GC content
%: 46.456


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Aco003625.png