Gene

Acomosus Aco008053

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Acomosus_Aco008053
Aco008053
LG21 8406602 8409189 Phytozome v3 Ananas_comosus
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Acomosus_Aco008053.1
Aco008053.1
PAC:33032591
High No 267
Coding potential...
Type: noncoding Potential: -1.591
Folding energies...
MFEI: -22.622 AMFE: -0.549
GC content
%: 41.199


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Aco008053.png