Gene

Acomosus Aco012444

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Acomosus_Aco012444
Aco012444
LG01 2000631 2001911 Phytozome v3 Ananas_comosus
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Acomosus_Aco012444.1
Aco012444.1
PAC:33050679
High No 543
Coding potential...
Type: noncoding Potential: -1.591
Folding energies...
MFEI: -19.227 AMFE: -0.346
GC content
%: 55.617


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Aco012444.png