Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Athaliana_AT3G24518 AT3G24518 |
Chr3 | 8938106 | 8942488 | Phytozome | TAIR10 | Arabidopsis_thaliana | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Athaliana_AT3G24518.1 AT3G24518.1 |
High | No | 1169 | Get ORF Coding potential... Type: noncoding Potential: -1.133 Folding energies... MFEI: -24.885 AMFE: -0.547 GC content %: 45.508 | |
Athaliana_AT3G24518.2 AT3G24518.2 |
High | No | 1897 | Get ORF Coding potential... Type: noncoding Potential: -0.909 Folding energies... MFEI: -27.190 AMFE: -0.613 GC content %: 44.385 |