Gene

Bdistachyon Bradi1g70215

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Bdistachyon_Bradi1g70215
Bradi1g70215
Bd1 68840646 68840954 Phytozome v3.1 Brachypodium_distachyon
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Bdistachyon_Bradi1g70215.1
Bradi1g70215.1
PAC:32805299
High No 309
Coding potential...
Type: noncoding Potential: -0.799
Folding energies...
MFEI: -49.223 AMFE: -0.676
GC content
%: 72.816


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Bradi1g70215.png