Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
CsubellipsoideaC169_Genemark1.1084_g CsubellipsoideaC169_Genemark1.1084_g |
scaffold_2 | 1859169 | 1859954 | Phytozome | v2.0 | Coccomyxa_subellipsoidea_C-169 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
CsubellipsoideaC169_59122 CsubellipsoideaC169_59122 PAC:27393296 |
Low | No | 285 | Get ORF Coding potential... Type: noncoding Potential: -0.522 Folding energies... MFEI: -34.000 AMFE: -0.606 GC content %: 56.140 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
CsubellipsoideaC169_59122 | SwissProt | 2015-06-01 | P32321 | 4.0e-8 |