Gene

Egrandis Eucgr.A00152

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Egrandis_Eucgr.A00152
Eucgr.A00152
Chr01 7505402 7506296 Phytozome v2.0 Eucalyptus_grandis
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Egrandis_Eucgr.A00152.1
Eucgr.A00152.1
PAC:32047154
High No 895
Coding potential...
Type: noncoding Potential: -1.018
Folding energies...
MFEI: -21.128 AMFE: -0.543
GC content
%: 38.883


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Eucgr.A00152.png