Gene

Lusitatissimum Lus10000001.g

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Lusitatissimum_Lus10000001.g
Lus10000001.g
C8001359 16 228 Phytozome v1.0 Linum_usitatissimum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Lusitatissimum_Lus10000001
Lus10000001
PAC:23178686
High No 213
Coding potential...
Type: noncoding Potential: -0.804
Folding energies...
MFEI: -22.582 AMFE: -0.491
GC content
%: 46.009


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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