Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Macuminata_GSMUA_Achr10G00060_001 GSMUA_Achr10G00060_001 |
chr10 | 481753 | 484968 | Phytozome | v1 | Musa_acuminata | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Macuminata_GSMUA_Achr10T00060_001 GSMUA_Achr10T00060_001 PAC:32322865 |
Low | No | 500 | Get ORF Coding potential... Type: noncoding Potential: -0.420 Folding energies... MFEI: -26.380 AMFE: -0.602 GC content %: 43.800 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Macuminata_GSMUA_Achr10T00060_001 | SwissProt | 2015-06-01 | Q5BJC2 | 3.0e-21 |