Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
MpusillaRCC299_AZW_EuGene.0000050438 MpusillaRCC299_AZW_EuGene.0000050438 |
Chr_04 | 844220 | 844459 | Phytozome | v3.0 | Micromonas_pusilla_RCC299 | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
MpusillaRCC299_113350 MpusillaRCC299_113350 PAC:27400110 |
Low | No | 240 | Get ORF Coding potential... Type: noncoding Potential: -0.927 Folding energies... MFEI: -28.667 AMFE: -0.533 GC content %: 53.750 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
MpusillaRCC299_113350 | SwissProt | 2015-06-01 | Q5FNB8 | 2.0e-9 |