Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Ppatens_Pp3c25_5480 Pp3c25_5480 |
Chr25 | 3586444 | 3588709 | Phytozome | v3.3 | Physcomitrella_patens | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Ppatens_Pp3c25_5480V3.1 Pp3c25_5480V3.1 PAC:32980873 |
High | No | 788 | Get ORF Coding potential... Type: noncoding Potential: -0.938 Folding energies... MFEI: -38.185 AMFE: -0.687 GC content %: 55.584 | |
Ppatens_Pp3c25_5480V3.2 Pp3c25_5480V3.2 PAC:32980874 |
High | No | 1299 | Get ORF Coding potential... Type: noncoding Potential: -1.002 Folding energies... MFEI: -37.021 AMFE: -0.684 GC content %: 54.119 |