Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Smoellendorffii_111624 111624 |
scaffold_42 | 698784 | 699080 | Phytozome | v1.0 | Selaginella_moellendorffii | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Smoellendorffii_111624 111624 PAC:15411915 |
Low | No | 297 | Get ORF Coding potential... Type: noncoding Potential: -0.706 Folding energies... MFEI: -27.879 AMFE: -0.571 GC content %: 48.822 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Smoellendorffii_111624 | SwissProt | 2015-06-01 | Q05D32 | 4.0e-9 |