Gene

Smoellendorffii 69660

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Smoellendorffii_69660
69660
scaffold_1 1200394 1200670 Phytozome v1.0 Selaginella_moellendorffii
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Smoellendorffii_69660
69660
PAC:15418891
High No 210
Coding potential...
Type: noncoding Potential: -0.819
Folding energies...
MFEI: -28.857 AMFE: -0.532
GC content
%: 54.286


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

69660.png