Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2AS_25A1CD8ED Traes_2AS_25A1CD8ED |
ta_iwgsc_2as_v1_5272524 | 122 | 803 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2AS_25A1CD8ED.2 Traes_2AS_25A1CD8ED.2 PAC:31853390 |
Low | No | 459 | Get ORF Coding potential... Type: noncoding Potential: -0.859 Folding energies... MFEI: -17.364 AMFE: -0.511 GC content %: 33.987 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_2AS_25A1CD8ED.2 | RepBase (RepeatMasker) | 2014-01-31 | HELITRON4_OS |