Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Tcacao_Thecc1EG027407 Thecc1EG027407 |
scaffold_6 | 3646825 | 3647457 | Phytozome | v1.1 | Theobroma_cacao | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Tcacao_Thecc1EG027407t1 Thecc1EG027407t1 PAC:27437744 |
High | No | 633 | Get ORF Coding potential... Type: noncoding Potential: -0.514 Folding energies... MFEI: -23.507 AMFE: -0.658 GC content %: 35.703 |