Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Vvinifera_GSVIVG01026798001 GSVIVG01026798001 |
chr15 | 7435535 | 7436055 | Phytozome | Genoscope.12X | Vitis_vinifera | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Vvinifera_GSVIVT01026798001 GSVIVT01026798001 PAC:17834370 |
Low | No | 374 | Get ORF Coding potential... Type: noncoding Potential: -0.078 Folding energies... MFEI: -23.289 AMFE: -0.640 GC content %: 36.364 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Vvinifera_GSVIVT01026798001 | SwissProt | 2015-06-01 | F4HVY0 | 1.0e-12 |