| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Ppersica Prupe.1G000900 | Pp01 | 130255 | 133073 | 1 |
| Ppersica Prupe.1G001900 | Pp01 | 223664 | 224285 | 1 |
| Ppersica Prupe.1G002000 | Pp01 | 224286 | 224629 | 1 |
| Ppersica Prupe.1G003800 | Pp01 | 372862 | 374457 | 1 |
| Ppersica Prupe.1G004600 | Pp01 | 410241 | 410930 | 1 |
| Ppersica Prupe.1G005200 | Pp01 | 460390 | 460867 | 1 |
| Ppersica Prupe.1G006200 | Pp01 | 524652 | 525294 | 1 |
| Ppersica Prupe.1G007600 | Pp01 | 653770 | 653988 | 1 |
| Ppersica Prupe.1G010100 | Pp01 | 778038 | 778621 | 1 |
| Ppersica Prupe.1G010200 | Pp01 | 783549 | 785635 | 1 |
| Ppersica Prupe.1G010800 | Pp01 | 825413 | 826188 | 1 |
| Ppersica Prupe.1G010900 | Pp01 | 827062 | 829360 | 1 |
| Ppersica Prupe.1G011100 | Pp01 | 851353 | 852586 | 1 |
| Ppersica Prupe.1G012300 | Pp01 | 938291 | 941402 | 1 |
| Ppersica Prupe.1G012500 | Pp01 | 950246 | 955472 | 2 |
| Ppersica Prupe.1G012900 | Pp01 | 981494 | 982472 | 2 |
| Ppersica Prupe.1G014700 | Pp01 | 1078476 | 1079342 | 1 |
| Ppersica Prupe.1G015000 | Pp01 | 1086773 | 1087137 | 1 |
| Ppersica Prupe.1G015200 | Pp01 | 1097198 | 1099456 | 2 |
| Ppersica Prupe.1G016100 | Pp01 | 1150542 | 1151601 | 1 |
| Ppersica Prupe.1G016200 | Pp01 | 1161147 | 1163983 | 1 |
| Ppersica Prupe.1G017500 | Pp01 | 1203695 | 1204270 | 1 |
| Ppersica Prupe.1G017600 | Pp01 | 1205457 | 1206046 | 1 |
| Ppersica Prupe.1G019300 | Pp01 | 1347851 | 1348210 | 1 |
| Ppersica Prupe.1G022800 | Pp01 | 1563532 | 1565534 | 2 |
| Ppersica Prupe.1G025800 | Pp01 | 1784307 | 1785488 | 1 |
| Ppersica Prupe.1G026000 | Pp01 | 1801994 | 1804254 | 1 |
| Ppersica Prupe.1G026300 | Pp01 | 1819286 | 1821917 | 1 |
| Ppersica Prupe.1G028700 | Pp01 | 2021905 | 2023947 | 1 |
| Ppersica Prupe.1G030100 | Pp01 | 2154421 | 2154871 | 1 |
| Ppersica Prupe.1G031000 | Pp01 | 2211749 | 2213165 | 1 |
| Ppersica Prupe.1G031600 | Pp01 | 2235128 | 2236114 | 1 |
| Ppersica Prupe.1G031900 | Pp01 | 2247915 | 2248620 | 1 |
| Ppersica Prupe.1G032400 | Pp01 | 2273495 | 2274083 | 1 |
| Ppersica Prupe.1G032500 | Pp01 | 2275504 | 2276589 | 1 |
| Ppersica Prupe.1G032700 | Pp01 | 2278899 | 2279637 | 1 |
| Ppersica Prupe.1G032900 | Pp01 | 2290158 | 2291151 | 1 |
| Ppersica Prupe.1G033100 | Pp01 | 2299722 | 2300027 | 1 |
| Ppersica Prupe.1G033300 | Pp01 | 2304541 | 2305151 | 1 |
| Ppersica Prupe.1G034700 | Pp01 | 2434293 | 2435128 | 1 |
| Ppersica Prupe.1G038200 | Pp01 | 2685985 | 2686616 | 1 |
| Ppersica Prupe.1G039400 | Pp01 | 2802857 | 2804458 | 1 |
| Ppersica Prupe.1G042600 | Pp01 | 3057042 | 3057694 | 1 |
| Ppersica Prupe.1G044100 | Pp01 | 3152163 | 3153857 | 2 |
| Ppersica Prupe.1G044200 | Pp01 | 3156760 | 3157381 | 1 |
| Ppersica Prupe.1G044400 | Pp01 | 3175666 | 3176456 | 1 |
| Ppersica Prupe.1G046100 | Pp01 | 3279311 | 3281980 | 1 |
| Ppersica Prupe.1G047200 | Pp01 | 3337864 | 3339534 | 1 |
| Ppersica Prupe.1G052000 | Pp01 | 3626754 | 3627035 | 1 |
| Ppersica Prupe.1G052800 | Pp01 | 3690155 | 3690926 | 1 |