| Gene alias | Chrom. | Start | End | Num. of lncRNAs |
|---|---|---|---|---|
| Slycopersicum Solyc00g005060.1 | SL2.50ch00 | 723746 | 724018 | 1 |
| Slycopersicum Solyc00g005090.1 | SL2.50ch00 | 1061638 | 1061922 | 1 |
| Slycopersicum Solyc00g005450.1 | SL2.50ch00 | 2466347 | 2466610 | 1 |
| Slycopersicum Solyc00g005860.1 | SL2.50ch00 | 3434263 | 3434662 | 1 |
| Slycopersicum Solyc00g006020.1 | SL2.50ch00 | 3945103 | 3945420 | 1 |
| Slycopersicum Solyc00g006250.1 | SL2.50ch00 | 4147269 | 4147568 | 1 |
| Slycopersicum Solyc00g006500.1 | SL2.50ch00 | 4371057 | 4371302 | 1 |
| Slycopersicum Solyc00g006510.1 | SL2.50ch00 | 4372350 | 4372637 | 1 |
| Slycopersicum Solyc00g006680.1 | SL2.50ch00 | 5631469 | 5631876 | 1 |
| Slycopersicum Solyc00g006690.2 | SL2.50ch00 | 5655376 | 5656165 | 1 |
| Slycopersicum Solyc00g006840.2 | SL2.50ch00 | 6188893 | 6189237 | 1 |
| Slycopersicum Solyc00g006860.1 | SL2.50ch00 | 6280046 | 6280420 | 1 |
| Slycopersicum Solyc00g006880.1 | SL2.50ch00 | 6435741 | 6436803 | 1 |
| Slycopersicum Solyc00g007140.1 | SL2.50ch00 | 6749922 | 6750245 | 1 |
| Slycopersicum Solyc00g007150.2 | SL2.50ch00 | 6750640 | 6751129 | 1 |
| Slycopersicum Solyc00g007170.1 | SL2.50ch00 | 6760470 | 6761009 | 1 |
| Slycopersicum Solyc00g007950.1 | SL2.50ch00 | 7487561 | 7487896 | 1 |
| Slycopersicum Solyc00g007980.1 | SL2.50ch00 | 7503481 | 7503816 | 1 |
| Slycopersicum Solyc00g008040.1 | SL2.50ch00 | 7565656 | 7566474 | 1 |
| Slycopersicum Solyc00g008090.1 | SL2.50ch00 | 7647150 | 7647461 | 1 |
| Slycopersicum Solyc00g008150.1 | SL2.50ch00 | 7706051 | 7706356 | 1 |
| Slycopersicum Solyc00g008580.1 | SL2.50ch00 | 8348718 | 8348924 | 1 |
| Slycopersicum Solyc00g008690.1 | SL2.50ch00 | 8506115 | 8506387 | 1 |
| Slycopersicum Solyc00g009080.2 | SL2.50ch00 | 8777405 | 8778182 | 1 |
| Slycopersicum Solyc00g009650.1 | SL2.50ch00 | 9262289 | 9262606 | 1 |
| Slycopersicum Solyc00g009770.1 | SL2.50ch00 | 9354441 | 9354677 | 1 |
| Slycopersicum Solyc00g009780.1 | SL2.50ch00 | 9356951 | 9357169 | 1 |
| Slycopersicum Solyc00g009800.1 | SL2.50ch00 | 9383663 | 9383881 | 1 |
| Slycopersicum Solyc00g010110.1 | SL2.50ch00 | 9587380 | 9587637 | 1 |
| Slycopersicum Solyc00g010520.1 | SL2.50ch00 | 9783567 | 9783779 | 1 |
| Slycopersicum Solyc00g010810.1 | SL2.50ch00 | 9940334 | 9940678 | 1 |
| Slycopersicum Solyc00g011150.1 | SL2.50ch00 | 10077098 | 10077304 | 1 |
| Slycopersicum Solyc00g011170.1 | SL2.50ch00 | 10078265 | 10078483 | 1 |
| Slycopersicum Solyc00g013100.1 | SL2.50ch00 | 10664455 | 10664691 | 1 |
| Slycopersicum Solyc00g013110.1 | SL2.50ch00 | 10665573 | 10665839 | 1 |
| Slycopersicum Solyc00g013150.1 | SL2.50ch00 | 10685404 | 10685697 | 1 |
| Slycopersicum Solyc00g013170.1 | SL2.50ch00 | 10689137 | 10689346 | 1 |
| Slycopersicum Solyc00g013190.1 | SL2.50ch00 | 10692250 | 10692603 | 1 |
| Slycopersicum Solyc00g014170.1 | SL2.50ch00 | 10915484 | 10915768 | 1 |
| Slycopersicum Solyc00g014190.1 | SL2.50ch00 | 10934339 | 10934554 | 1 |
| Slycopersicum Solyc00g014290.1 | SL2.50ch00 | 10956900 | 10957446 | 1 |
| Slycopersicum Solyc00g014390.1 | SL2.50ch00 | 10970829 | 10971095 | 1 |
| Slycopersicum Solyc00g014790.2 | SL2.50ch00 | 11057662 | 11060177 | 1 |
| Slycopersicum Solyc00g014840.1 | SL2.50ch00 | 11072542 | 11072883 | 1 |
| Slycopersicum Solyc00g014850.1 | SL2.50ch00 | 11073759 | 11074070 | 1 |
| Slycopersicum Solyc00g014860.1 | SL2.50ch00 | 11074683 | 11074992 | 1 |
| Slycopersicum Solyc00g016890.1 | SL2.50ch00 | 11415230 | 11417810 | 1 |
| Slycopersicum Solyc00g016910.1 | SL2.50ch00 | 11422250 | 11425478 | 1 |
| Slycopersicum Solyc00g017540.1 | SL2.50ch00 | 11514244 | 11514622 | 1 |
| Slycopersicum Solyc00g017550.1 | SL2.50ch00 | 11518109 | 11518487 | 1 |