Aalpina AALP AA1G130700

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Aalpina_AALP_AA1G130700
[ AALP_AA1G130700]
1 7393284 7394402 v4 Arabis alpina (Ensembl Plants 51)
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Aalpina_KFK43484
KFK43484
High No 956 OG0092922
Coding potential...
Type: noncoding Potential: -0.304
Folding energies...
MFEI: -23.190 AMFE: -0.614
GC content
%: 37.762


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Aalpina_AALP_AA1G130700.png