Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Aalpina_AALP_AA4G270400 [ AALP_AA4G270400] |
4 | 23162188 | 23162660 | v4 | Arabis alpina (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Aalpina_KFK37541 KFK37541 |
Low | No | 397 | OG0092570 | Get ORF Coding potential... Type: noncoding Potential: -0.588 Folding energies... MFEI: -29.547 AMFE: -0.617 GC content %: 47.859 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Aalpina_KFK37541 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |