Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Aalpina_AALP_AA7G147800 [ AALP_AA7G147800] |
7 | 17741661 | 17743100 | v4 | Arabis alpina (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Aalpina_KFK29545 KFK29545 |
Low | No | 692 | OG0092068 | Get ORF Coding potential... Type: noncoding Potential: -1.172 Folding energies... MFEI: -25.477 AMFE: -0.623 GC content %: 40.896 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Aalpina_KFK29545 | SwissProt | 2021-04-01 | Q5ZLH4 | 5.33e-4 |