Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Aalpina_AALP_AA7G268800 [ AALP_AA7G268800] |
7 | 28417931 | 28418623 | v4 | Arabis alpina (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Aalpina_KFK30494 KFK30494 |
Low | Yes | 595 | OG0092127 | Get ORF Coding potential... Type: noncoding Potential: -0.396 Folding energies... MFEI: -21.832 AMFE: -0.634 GC content %: 34.454 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Aalpina_KFK30494 | Rfam | 14.6 | mir-598 | 0.0016 |
Aalpina_KFK30494 | RepBase (RepeatMasker) | 2014-01-31 | LTR/Gypsy |