Achinensis CEY00 Acc01190

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Assembly Species Details

Achinensis_CEY00_Acc01190
[ CEY00_Acc01190]
LG1 17621067 17621753 Red5_PS1_1.69.0 Actinidia chinensis (Ensembl Plants 51)
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Orthologous group Sequence Details

Achinensis_PSS36670
PSS36670
High No 687 OG0067526
Coding potential...
Type: noncoding Potential: -0.561
Folding energies...
MFEI: -16.332 AMFE: -0.361
GC content
%: 45.269


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Achinensis_CEY00_Acc01190.png