Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Achinensis_CEY00_Acc17577 [ CEY00_Acc17577] |
LG16 | 313273 | 318403 | Red5_PS1_1.69.0 | Actinidia chinensis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Achinensis_PSS07238 PSS07238 |
Low | No | 5131 | OG0067014 | Get ORF Coding potential... Type: noncoding Potential: -0.871 Folding energies... MFEI: -25.151 AMFE: -0.663 GC content %: 37.907 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Achinensis_PSS07238 | RepBase (RepeatMasker) | 2014-01-31 | DNA/hAT-Tag1; LTR/ERV1 |