Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Achinensis_CEY00_Acc21527 [ CEY00_Acc21527] |
LG19 | 15053642 | 15061753 | Red5_PS1_1.69.0 | Actinidia chinensis (Ensembl Plants 51) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Achinensis_PSS03144 PSS03144 |
Low | No | 7995 | OG0066959 | Get ORF Coding potential... Type: noncoding Potential: -0.926 Folding energies... MFEI: -22.679 AMFE: -0.693 GC content %: 32.708 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Achinensis_PSS03144 | RepBase (RepeatMasker) | 2014-01-31 | DNA/hAT-Tip100; LTR/Gypsy |