Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe1G019100 [ Aqcoe1G019100] |
Chr_01 | 980437 | 982704 | v3.1 | Aquilegia coerulea (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe1G019100.1 Aqcoe1G019100.1 |
High | No | 1025 | OG0016861 | Get ORF Coding potential... Type: noncoding Potential: -1.002 Folding energies... MFEI: -27.824 AMFE: -0.689 GC content %: 40.390 | |
Acoerulea_Aqcoe1G019100.2 Aqcoe1G019100.2 |
High | No | 1012 | OG0016861 | Get ORF Coding potential... Type: noncoding Potential: -1.070 Folding energies... MFEI: -27.164 AMFE: -0.672 GC content %: 40.415 | |
Acoerulea_Aqcoe1G019100.3 Aqcoe1G019100.3 |
High | No | 608 | OG0016861 | Get ORF Coding potential... Type: noncoding Potential: -1.088 Folding energies... MFEI: -28.076 AMFE: -0.652 GC content %: 43.092 |