Gene alias / name | Chrom. | Start | End | Assembly | Species | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe3G180500 [ Aqcoe3G180500] |
Chr_03 | 18164411 | 18166597 | v3.1 | Aquilegia coerulea (Phytozome 13) | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Orthologous group | Sequence | Details
|
---|---|---|---|---|---|---|
Acoerulea_Aqcoe3G180500.1 Aqcoe3G180500.1 |
High | No | 713 | OG0016893 | Get ORF Coding potential... Type: noncoding Potential: -1.079 Folding energies... MFEI: -23.689 AMFE: -0.621 GC content %: 38.149 | |
Acoerulea_Aqcoe3G180500.2 Aqcoe3G180500.2 |
High | No | 509 | OG0016893 | Get ORF Coding potential... Type: noncoding Potential: -1.009 Folding energies... MFEI: -21.827 AMFE: -0.585 GC content %: 37.328 | |
Acoerulea_Aqcoe3G180500.3 Aqcoe3G180500.3 |
High | No | 450 | OG0016893 | Get ORF Coding potential... Type: noncoding Potential: -1.171 Folding energies... MFEI: -21.644 AMFE: -0.587 GC content %: 36.889 |